Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chd1lQ9CXF7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd1lQ9CXF7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chd1lQ9CXF7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chd1lQ9CXF7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chd1lQ9CXF7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.83■□□□□ 0.76
Chd1lQ9CXF7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chd1lQ9CXF7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.83■□□□□ 0.76
Chd1lQ9CXF7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Chd1lQ9CXF7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.82■□□□□ 0.76
Chd1lQ9CXF7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chd1lQ9CXF7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Gm9988-201ENSMUST00000069786 435 ntBASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chd1lQ9CXF7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms