Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm10698-201ENSMUST00000182663 604 ntBASIC19.58■□□□□ 0.72
Smc1aQ9CU62 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.58■□□□□ 0.72
Smc1aQ9CU62 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.58■□□□□ 0.72
Smc1aQ9CU62 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1aQ9CU62 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1aQ9CU62 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Gm13158-201ENSMUST00000122007 736 ntBASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smc1aQ9CU62 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1aQ9CU62 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1aQ9CU62 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc1aQ9CU62 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc1aQ9CU62 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc1aQ9CU62 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc1aQ9CU62 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc1aQ9CU62 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc1aQ9CU62 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smc1aQ9CU62 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.51■□□□□ 0.71
Smc1aQ9CU62 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms