Protein–RNA interactions for Protein: Q9CR56

Nkiras2, NF-kappa-B inhibitor-interacting Ras-like protein 2, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkiras2Q9CR56 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nkiras2Q9CR56 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Nkiras2Q9CR56 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Gm6365-201ENSMUST00000054711 744 ntBASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Nkiras2Q9CR56 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nkiras2Q9CR56 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nkiras2Q9CR56 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.8■□□□□ 0.12
Nkiras2Q9CR56 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkiras2Q9CR56 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nkiras2Q9CR56 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Nkiras2Q9CR56 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkiras2Q9CR56 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nkiras2Q9CR56 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms