Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Gm10654-201ENSMUST00000098653 1633 ntBASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61bQ9CQS8 Gm28265-201ENSMUST00000188201 2319 ntBASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Mir5130-201ENSMUST00000175160 84 ntBASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Gm38027-201ENSMUST00000192315 235 ntBASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Gm45058-201ENSMUST00000205810 766 ntBASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Gm18101-201ENSMUST00000215769 548 ntBASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61bQ9CQS8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Sec61bQ9CQS8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm38345-201ENSMUST00000192635 1748 ntBASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm13474-201ENSMUST00000122466 815 ntBASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm6659-201ENSMUST00000174752 547 ntBASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm7367-201ENSMUST00000057611 492 ntBASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Gm15853-202ENSMUST00000195518 2041 ntBASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Sec61bQ9CQS8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Gm21362-201ENSMUST00000194272 928 ntBASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 AC134329.2-201ENSMUST00000217897 428 ntBASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms