Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
H2afb1Q9CQ70 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1Q9CQ70 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
H2afb1Q9CQ70 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
H2afb1Q9CQ70 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.36□□□□□ -0.11
H2afb1Q9CQ70 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.35□□□□□ -0.11
H2afb1Q9CQ70 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H2afb1Q9CQ70 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H2afb1Q9CQ70 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
H2afb1Q9CQ70 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Mir6349-201ENSMUST00000184059 97 ntBASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Gm37179-201ENSMUST00000194862 823 ntBASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Gm5408-201ENSMUST00000197998 747 ntBASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Gm2559-201ENSMUST00000201323 363 ntBASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H2afb1Q9CQ70 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
H2afb1Q9CQ70 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Gm11643-201ENSMUST00000119578 864 ntBASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
H2afb1Q9CQ70 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms