Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Gm7284-201ENSMUST00000131667 944 ntBASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Gm5587-201ENSMUST00000206270 674 ntBASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Prpf8Q99PV0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Gm10418-201ENSMUST00000100943 576 ntBASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.31□□□□□ -0.12
Prpf8Q99PV0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Gm9013-201ENSMUST00000132939 882 ntBASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Gm4974-201ENSMUST00000209974 875 ntBASIC14.3□□□□□ -0.12
Prpf8Q99PV0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Gm9103-201ENSMUST00000119371 405 ntBASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Gm14859-201ENSMUST00000117752 357 ntBASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Prpf8Q99PV0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Fst-202ENSMUST00000223640 2612 ntBASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms