Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim34aQ99PP6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34aQ99PP6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34aQ99PP6 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34aQ99PP6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim34aQ99PP6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim34aQ99PP6 Fst-202ENSMUST00000223640 2612 ntBASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Gm27704-201ENSMUST00000185094 107 ntBASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
Trim34aQ99PP6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim34aQ99PP6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Trim34aQ99PP6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms