Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Gm38285-201ENSMUST00000192928 922 ntBASIC15.35■□□□□ 0.05
Scrt1Q99M85 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.35■□□□□ 0.05
Scrt1Q99M85 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.35■□□□□ 0.05
Scrt1Q99M85 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scrt1Q99M85 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Scrt1Q99M85 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Gm14859-201ENSMUST00000117752 357 ntBASIC15.34■□□□□ 0.05
Scrt1Q99M85 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Gm45058-201ENSMUST00000205810 766 ntBASIC15.34■□□□□ 0.05
Scrt1Q99M85 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.34■□□□□ 0.05
Scrt1Q99M85 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.34■□□□□ 0.05
Scrt1Q99M85 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Scrt1Q99M85 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Scrt1Q99M85 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.33■□□□□ 0.05
Scrt1Q99M85 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Scrt1Q99M85 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Scrt1Q99M85 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.33■□□□□ 0.04
Scrt1Q99M85 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Scrt1Q99M85 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.32■□□□□ 0.04
Scrt1Q99M85 Mir5130-201ENSMUST00000175160 84 ntBASIC15.32■□□□□ 0.04
Scrt1Q99M85 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Gm18101-201ENSMUST00000215769 548 ntBASIC15.32■□□□□ 0.04
Scrt1Q99M85 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Scrt1Q99M85 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.31■□□□□ 0.04
Scrt1Q99M85 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Scrt1Q99M85 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Scrt1Q99M85 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.31■□□□□ 0.04
Scrt1Q99M85 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms