Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.47■□□□□ 0.39
Cstf1Q99LC2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cstf1Q99LC2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Gm18958-201ENSMUST00000174258 762 ntBASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Gm7370-201ENSMUST00000219471 767 ntBASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Mzt1-203ENSMUST00000227948 952 ntBASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.46■□□□□ 0.39
Cstf1Q99LC2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cstf1Q99LC2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Cstf1Q99LC2 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.46■□□□□ 0.38
Cstf1Q99LC2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cstf1Q99LC2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.44■□□□□ 0.38
Cstf1Q99LC2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Gm25925-201ENSMUST00000158314 306 ntBASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Mir3081-201ENSMUST00000175305 84 ntBASIC17.43■□□□□ 0.38
Cstf1Q99LC2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cstf1Q99LC2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cstf1Q99LC2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cstf1Q99LC2 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms