Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Thumpd1Q99J36 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Thumpd1Q99J36 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Thumpd1Q99J36 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Thumpd1Q99J36 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.1
Thumpd1Q99J36 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
Thumpd1Q99J36 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Gm10418-201ENSMUST00000100943 576 ntBASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Thumpd1Q99J36 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Mir8112-201ENSMUST00000184382 131 ntBASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Thumpd1Q99J36 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms