Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trps1Q925H1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trps1Q925H1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trps1Q925H1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.16■□□□□ 0.5
Trps1Q925H1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Gm13168-201ENSMUST00000121771 632 ntBASIC18.16■□□□□ 0.5
Trps1Q925H1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trps1Q925H1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.16■□□□□ 0.5
Trps1Q925H1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trps1Q925H1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trps1Q925H1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trps1Q925H1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Trps1Q925H1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trps1Q925H1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.15■□□□□ 0.5
Trps1Q925H1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trps1Q925H1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trps1Q925H1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trps1Q925H1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Trps1Q925H1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.14■□□□□ 0.49
Trps1Q925H1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Gm4974-201ENSMUST00000209974 875 ntBASIC18.14■□□□□ 0.49
Trps1Q925H1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.14■□□□□ 0.49
Trps1Q925H1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.14■□□□□ 0.49
Trps1Q925H1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trps1Q925H1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trps1Q925H1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Trps1Q925H1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Gm27011-201ENSMUST00000182352 972 ntBASIC18.13■□□□□ 0.49
Trps1Q925H1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.13■□□□□ 0.49
Trps1Q925H1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trps1Q925H1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trps1Q925H1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trps1Q925H1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.12■□□□□ 0.49
Trps1Q925H1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trps1Q925H1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.12■□□□□ 0.49
Trps1Q925H1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Trps1Q925H1 Gm8520-201ENSMUST00000186517 868 ntBASIC18.12■□□□□ 0.49
Trps1Q925H1 Gm10517-202ENSMUST00000192970 758 ntBASIC18.12■□□□□ 0.49
Trps1Q925H1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.12■□□□□ 0.49
Trps1Q925H1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Trps1Q925H1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trps1Q925H1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.12■□□□□ 0.49
Trps1Q925H1 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.11■□□□□ 0.49
Trps1Q925H1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trps1Q925H1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trps1Q925H1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trps1Q925H1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Trps1Q925H1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms