Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smc1bQ920F6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Gm12382-201ENSMUST00000122005 922 ntBASIC20.18■□□□□ 0.82
Smc1bQ920F6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.18■□□□□ 0.82
Smc1bQ920F6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smc1bQ920F6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Gm18032-201ENSMUST00000222541 538 ntBASIC20.17■□□□□ 0.82
Smc1bQ920F6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smc1bQ920F6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.16■□□□□ 0.82
Smc1bQ920F6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.15■□□□□ 0.82
Smc1bQ920F6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.15■□□□□ 0.82
Smc1bQ920F6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Gm9103-201ENSMUST00000119371 405 ntBASIC20.15■□□□□ 0.82
Smc1bQ920F6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smc1bQ920F6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smc1bQ920F6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.14■□□□□ 0.81
Smc1bQ920F6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.14■□□□□ 0.81
Smc1bQ920F6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smc1bQ920F6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms