Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Dancr-204ENSMUST00000132389 2347 ntBASIC17.41■□□□□ 0.38
Pcdhb4Q91XZ6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Gm26524-201ENSMUST00000192339 390 ntBASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Gm38285-201ENSMUST00000192928 922 ntBASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhb4Q91XZ6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhb4Q91XZ6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhb4Q91XZ6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Pcdhb4Q91XZ6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Rab3c-203ENSMUST00000224180 967 ntBASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Idnk-204ENSMUST00000226010 1898 ntBASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb4Q91XZ6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb4Q91XZ6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Gm12933-201ENSMUST00000120203 872 ntBASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Zfp783-201ENSMUST00000095946 670 ntBASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb4Q91XZ6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms