Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb5Q91XZ5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb5Q91XZ5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb5Q91XZ5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Gm14859-201ENSMUST00000117752 357 ntBASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Mir1668-201ENSMUST00000184114 107 ntBASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb5Q91XZ5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb5Q91XZ5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Gm7213-201ENSMUST00000215977 950 ntBASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb5Q91XZ5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.64■□□□□ 0.9
Pcdhb5Q91XZ5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb5Q91XZ5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb5Q91XZ5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb5Q91XZ5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhb5Q91XZ5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb5Q91XZ5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms