Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhga6Q91XY2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhga6Q91XY2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhga6Q91XY2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Gm7461-201ENSMUST00000058918 827 ntBASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhga6Q91XY2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhga6Q91XY2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Gm17661-201ENSMUST00000170317 270 ntBASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga6Q91XY2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms