Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgb5Q91XX5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgb5Q91XX5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
Pcdhgb5Q91XX5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgb5Q91XX5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgb5Q91XX5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgb5Q91XX5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Gm25016-201ENSMUST00000158399 131 ntBASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Gm37025-201ENSMUST00000195159 829 ntBASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhgb5Q91XX5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Gm7791-201ENSMUST00000219066 539 ntBASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhgb5Q91XX5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Pcdhgb5Q91XX5 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms