Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgc3Q91XX1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgc3Q91XX1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgc3Q91XX1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgc3Q91XX1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgc3Q91XX1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms