Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H1fooQ8VIK3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Gm4968-201ENSMUST00000071458 858 ntBASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
H1fooQ8VIK3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Gm29791-202ENSMUST00000207888 369 ntBASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H1fooQ8VIK3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H1fooQ8VIK3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Mtag2-201ENSMUST00000058665 714 ntBASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms