Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdhr1Q8VHP6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdhr1Q8VHP6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdhr1Q8VHP6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdhr1Q8VHP6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdhr1Q8VHP6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdhr1Q8VHP6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdhr1Q8VHP6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdhr1Q8VHP6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Gm45058-201ENSMUST00000205810 766 ntBASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdhr1Q8VHP6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Gm24841-201ENSMUST00000158676 357 ntBASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Gm2274-201ENSMUST00000184539 609 ntBASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.06■□□□□ 0.32
Cdhr1Q8VHP6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdhr1Q8VHP6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms