Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vps4aQ8VEJ9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vps4aQ8VEJ9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Vps4aQ8VEJ9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vps4aQ8VEJ9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Gm5643-201ENSMUST00000117081 966 ntBASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Gm8969-201ENSMUST00000199694 526 ntBASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vps4aQ8VEJ9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Vps4aQ8VEJ9 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.96■□□□□ 0.3
Vps4aQ8VEJ9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps4aQ8VEJ9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms