Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lmcd1Q8VEE1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lmcd1Q8VEE1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Lmcd1Q8VEE1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lmcd1Q8VEE1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lmcd1Q8VEE1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lmcd1Q8VEE1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lmcd1Q8VEE1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lmcd1Q8VEE1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lmcd1Q8VEE1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Lmcd1Q8VEE1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms