Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf8Q8VC56 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.89■□□□□ 0.3
Rnf8Q8VC56 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Rnf8Q8VC56 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf8Q8VC56 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf8Q8VC56 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf8Q8VC56 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf8Q8VC56 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Tgds-204ENSMUST00000228543 1594 ntBASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Gm8969-201ENSMUST00000199694 526 ntBASIC16.87■□□□□ 0.29
Rnf8Q8VC56 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf8Q8VC56 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.86■□□□□ 0.29
Rnf8Q8VC56 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf8Q8VC56 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms