Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna3Q8R4G9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chrna3Q8R4G9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chrna3Q8R4G9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna3Q8R4G9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna3Q8R4G9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna3Q8R4G9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Mir7071-201ENSMUST00000184847 69 ntBASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chrna3Q8R4G9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms