Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim29Q8R2Q0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim29Q8R2Q0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim29Q8R2Q0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim29Q8R2Q0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim29Q8R2Q0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim29Q8R2Q0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim29Q8R2Q0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Gm18666-201ENSMUST00000190039 958 ntBASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Trmt13-210ENSMUST00000198454 880 ntBASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim29Q8R2Q0 Gm45560-201ENSMUST00000211492 1472 ntBASIC20■□□□□ 0.79
Trim29Q8R2Q0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Gm37820-201ENSMUST00000194021 2147 ntBASIC20■□□□□ 0.79
Trim29Q8R2Q0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim29Q8R2Q0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Gm27011-201ENSMUST00000182352 972 ntBASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Trim29Q8R2Q0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms