Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zcchc9Q8R1J3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Zcchc9Q8R1J3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Zcchc9Q8R1J3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Zcchc9Q8R1J3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Zcchc9Q8R1J3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Zcchc9Q8R1J3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Zcchc9Q8R1J3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Zcchc9Q8R1J3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Zcchc9Q8R1J3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Zcchc9Q8R1J3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Zcchc9Q8R1J3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zcchc9Q8R1J3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zcchc9Q8R1J3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms