Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Rpp40Q8R1F9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpp40Q8R1F9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpp40Q8R1F9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Rpp40Q8R1F9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Rpp40Q8R1F9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Mir7071-201ENSMUST00000184847 69 ntBASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpp40Q8R1F9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rpp40Q8R1F9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Gm43799-201ENSMUST00000201845 579 ntBASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rpp40Q8R1F9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.73■□□□□ 0.59
Rpp40Q8R1F9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms