Protein–RNA interactions for Protein: Q8R0H9

Gga1, ADP-ribosylation factor-binding protein GGA1, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gga1Q8R0H9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gga1Q8R0H9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gga1Q8R0H9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gga1Q8R0H9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.77■□□□□ 0.59
Gga1Q8R0H9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.77■□□□□ 0.59
Gga1Q8R0H9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gga1Q8R0H9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gga1Q8R0H9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms