Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Gm10571-201ENSMUST00000097869 1638 ntBASIC11.01□□□□□ -0.65
Cystm1Q8K353 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cystm1Q8K353 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11□□□□□ -0.65
Cystm1Q8K353 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cystm1Q8K353 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Cystm1Q8K353 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11□□□□□ -0.65
Cystm1Q8K353 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cystm1Q8K353 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11□□□□□ -0.65
Cystm1Q8K353 Gm42569-201ENSMUST00000200539 472 ntBASIC11□□□□□ -0.65
Cystm1Q8K353 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11□□□□□ -0.65
Cystm1Q8K353 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cystm1Q8K353 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11□□□□□ -0.65
Cystm1Q8K353 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC11□□□□□ -0.65
Cystm1Q8K353 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11□□□□□ -0.65
Cystm1Q8K353 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cystm1Q8K353 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Gm42778-201ENSMUST00000199644 553 ntBASIC10.99□□□□□ -0.65
Cystm1Q8K353 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC10.99□□□□□ -0.65
Cystm1Q8K353 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC10.99□□□□□ -0.65
Cystm1Q8K353 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cystm1Q8K353 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Cystm1Q8K353 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cystm1Q8K353 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms