Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rl1Q8K0S5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rl1Q8K0S5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Mir770-201ENSMUST00000103252 94 ntBASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm7153-201ENSMUST00000117092 455 ntBASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm27742-201ENSMUST00000184667 60 ntBASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rtn4rl1Q8K0S5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm6623-201ENSMUST00000173570 544 ntBASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Mir3081-201ENSMUST00000175305 84 ntBASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm37722-201ENSMUST00000193757 208 ntBASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Rtn4rl1Q8K0S5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Gm27357-201ENSMUST00000183754 135 ntBASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rtn4rl1Q8K0S5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rtn4rl1Q8K0S5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms