Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Flg-201ENSMUST00000050758 1488 ntBASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hmgcs1Q8JZK9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgcs1Q8JZK9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgcs1Q8JZK9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Gm12933-201ENSMUST00000120203 872 ntBASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.73■□□□□ 0.27
Hmgcs1Q8JZK9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Hmgcs1Q8JZK9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hmgcs1Q8JZK9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms