Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.41■□□□□ 0.54
Q8CD60 Mir8112-201ENSMUST00000184382 131 ntBASIC18.41■□□□□ 0.54
Q8CD60 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Q8CD60 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Q8CD60 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Mir1199-201ENSMUST00000117015 119 ntBASIC18.4■□□□□ 0.54
Q8CD60 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Q8CD60 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Q8CD60 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.4■□□□□ 0.54
Q8CD60 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q8CD60 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.39■□□□□ 0.53
Q8CD60 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Q8CD60 Gm10517-202ENSMUST00000192970 758 ntBASIC18.39■□□□□ 0.53
Q8CD60 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.39■□□□□ 0.53
Q8CD60 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.39■□□□□ 0.53
Q8CD60 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q8CD60 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Q8CD60 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.38■□□□□ 0.53
Q8CD60 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.38■□□□□ 0.53
Q8CD60 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
Q8CD60 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8CD60 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Q8CD60 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.38■□□□□ 0.53
Q8CD60 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Q8CD60 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.37■□□□□ 0.53
Q8CD60 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.37■□□□□ 0.53
Q8CD60 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.37■□□□□ 0.53
Q8CD60 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.37■□□□□ 0.53
Q8CD60 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CD60 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.36■□□□□ 0.53
Q8CD60 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Q8CD60 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Q8CD60 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Q8CD60 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Q8CD60 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CD60 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Q8CD60 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms