Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim35Q8C006 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.07■□□□□ 0.48
Trim35Q8C006 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim35Q8C006 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.06■□□□□ 0.48
Trim35Q8C006 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.06■□□□□ 0.48
Trim35Q8C006 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim35Q8C006 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim35Q8C006 Gm11637-201ENSMUST00000120601 592 ntBASIC18.06■□□□□ 0.48
Trim35Q8C006 Gm12752-201ENSMUST00000121657 811 ntBASIC18.06■□□□□ 0.48
Trim35Q8C006 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim35Q8C006 Gm5408-201ENSMUST00000197998 747 ntBASIC18.06■□□□□ 0.48
Trim35Q8C006 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim35Q8C006 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim35Q8C006 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim35Q8C006 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim35Q8C006 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim35Q8C006 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 Gm27011-201ENSMUST00000182352 972 ntBASIC18.05■□□□□ 0.48
Trim35Q8C006 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim35Q8C006 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.05■□□□□ 0.48
Trim35Q8C006 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim35Q8C006 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.05■□□□□ 0.48
Trim35Q8C006 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim35Q8C006 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.04■□□□□ 0.48
Trim35Q8C006 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim35Q8C006 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim35Q8C006 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim35Q8C006 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim35Q8C006 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC18.04■□□□□ 0.48
Trim35Q8C006 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim35Q8C006 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim35Q8C006 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim35Q8C006 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Trim35Q8C006 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim35Q8C006 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Trim35Q8C006 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim35Q8C006 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim35Q8C006 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim35Q8C006 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.03■□□□□ 0.48
Trim35Q8C006 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim35Q8C006 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.03■□□□□ 0.48
Trim35Q8C006 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim35Q8C006 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms