Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sfr1Q8BP27 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Gm29791-202ENSMUST00000207888 369 ntBASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.79■□□□□ 0.44
Sfr1Q8BP27 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sfr1Q8BP27 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sfr1Q8BP27 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Sfr1Q8BP27 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sfr1Q8BP27 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sfr1Q8BP27 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sfr1Q8BP27 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sfr1Q8BP27 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Gm6576-201ENSMUST00000169678 883 ntBASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sfr1Q8BP27 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms