Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf18Q8BM39 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Gm5874-201ENSMUST00000096101 508 ntBASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf18Q8BM39 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Gm13534-201ENSMUST00000121169 513 ntBASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Prpf18Q8BM39 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prpf18Q8BM39 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Prpf18Q8BM39 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms