Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc40Q8BI79 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc40Q8BI79 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc40Q8BI79 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Ccdc40Q8BI79 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc40Q8BI79 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Zfp783-201ENSMUST00000095946 670 ntBASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc40Q8BI79 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc40Q8BI79 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.23■□□□□ 0.51
Ccdc40Q8BI79 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc40Q8BI79 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc40Q8BI79 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms