Protein–RNA interactions for Protein: Q80YR6

Rbbp8, DNA endonuclease RBBP8, mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbbp8Q80YR6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rbbp8Q80YR6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Gm6211-202ENSMUST00000167849 925 ntBASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.84■□□□□ 0.29
Rbbp8Q80YR6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rbbp8Q80YR6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rbbp8Q80YR6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Rbbp8Q80YR6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Gm29791-202ENSMUST00000207888 369 ntBASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rbbp8Q80YR6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Gm10418-201ENSMUST00000100943 576 ntBASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rbbp8Q80YR6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rbbp8Q80YR6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rbbp8Q80YR6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms