Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.44■□□□□ 0.38
Skida1Q80YR3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Skida1Q80YR3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Gm9987-201ENSMUST00000069768 567 ntBASIC17.44■□□□□ 0.38
Skida1Q80YR3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Skida1Q80YR3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.43■□□□□ 0.38
Skida1Q80YR3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gm37638-201ENSMUST00000194337 1123 ntBASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.43■□□□□ 0.38
Skida1Q80YR3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Skida1Q80YR3 Gm42941-201ENSMUST00000200347 1321 ntBASIC17.43■□□□□ 0.38
Skida1Q80YR3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm12656-201ENSMUST00000118149 577 ntBASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm16420-201ENSMUST00000120258 856 ntBASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.42■□□□□ 0.38
Skida1Q80YR3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.42■□□□□ 0.38
Skida1Q80YR3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm7439-201ENSMUST00000214053 835 ntBASIC17.42■□□□□ 0.38
Skida1Q80YR3 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Skida1Q80YR3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.41■□□□□ 0.38
Skida1Q80YR3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.41■□□□□ 0.38
Skida1Q80YR3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.41■□□□□ 0.38
Skida1Q80YR3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Skida1Q80YR3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Gm8988-201ENSMUST00000155015 1240 ntBASIC17.4■□□□□ 0.38
Skida1Q80YR3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms