Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.22■□□□□ 0.83
Prpf40bQ80W14 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Mir5130-201ENSMUST00000175160 84 ntBASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf40bQ80W14 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Gm7284-201ENSMUST00000131667 944 ntBASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Prpf40bQ80W14 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf40bQ80W14 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf40bQ80W14 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Gm27463-201ENSMUST00000183569 57 ntBASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.17■□□□□ 0.82
Prpf40bQ80W14 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf40bQ80W14 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf40bQ80W14 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Gm17661-201ENSMUST00000170317 270 ntBASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Gm22697-201ENSMUST00000175194 63 ntBASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf40bQ80W14 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms