Protein–RNA interactions for Protein: Q80TM6

R3hdm2, R3H domain-containing protein 2, mousemouse

Known RBP Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm2Q80TM6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
R3hdm2Q80TM6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.85■□□□□ 0.61
R3hdm2Q80TM6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Mir5122-201ENSMUST00000175004 89 ntBASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3hdm2Q80TM6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm2Q80TM6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm2Q80TM6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm2Q80TM6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3hdm2Q80TM6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3hdm2Q80TM6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
R3hdm2Q80TM6 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
R3hdm2Q80TM6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3hdm2Q80TM6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms