Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh19Q80TF3 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh19Q80TF3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh19Q80TF3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Gm13559-201ENSMUST00000120476 863 ntBASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdh19Q80TF3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdh19Q80TF3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms