Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.31■□□□□ 0.36
Pcdh8Q7TSK3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdh8Q7TSK3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdh8Q7TSK3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh8Q7TSK3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh8Q7TSK3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh8Q7TSK3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh8Q7TSK3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh8Q7TSK3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh8Q7TSK3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh8Q7TSK3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms