Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Otub1Q7TQI3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Gm26524-201ENSMUST00000192339 390 ntBASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Gm5408-201ENSMUST00000197998 747 ntBASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Otub1Q7TQI3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Otub1Q7TQI3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.66■□□□□ 0.26
Otub1Q7TQI3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Otub1Q7TQI3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Otub1Q7TQI3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Otub1Q7TQI3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Gm2399-201ENSMUST00000104944 225 ntBASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Otub1Q7TQI3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms