Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn4bQ7M729 Gm15375-201ENSMUST00000119510 849 ntBASIC17.08■□□□□ 0.32
Scn4bQ7M729 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.08■□□□□ 0.32
Scn4bQ7M729 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.08■□□□□ 0.32
Scn4bQ7M729 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn4bQ7M729 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn4bQ7M729 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn4bQ7M729 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.08■□□□□ 0.32
Scn4bQ7M729 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn4bQ7M729 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn4bQ7M729 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.07■□□□□ 0.32
Scn4bQ7M729 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Gm13158-201ENSMUST00000122007 736 ntBASIC17.07■□□□□ 0.32
Scn4bQ7M729 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn4bQ7M729 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Gm37856-201ENSMUST00000191634 999 ntBASIC17.06■□□□□ 0.32
Scn4bQ7M729 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn4bQ7M729 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Gm13401-201ENSMUST00000117074 291 ntBASIC17.05■□□□□ 0.32
Scn4bQ7M729 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn4bQ7M729 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Trmt13-210ENSMUST00000198454 880 ntBASIC17.04■□□□□ 0.32
Scn4bQ7M729 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.04■□□□□ 0.32
Scn4bQ7M729 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn4bQ7M729 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn4bQ7M729 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms