Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.76□□□□□ -0.05
Rif1Q6PR54 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.75□□□□□ -0.05
Rif1Q6PR54 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rif1Q6PR54 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.75□□□□□ -0.05
Rif1Q6PR54 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Gm12644-201ENSMUST00000119935 606 ntBASIC14.74□□□□□ -0.05
Rif1Q6PR54 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rif1Q6PR54 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Gm9727-201ENSMUST00000161387 555 ntBASIC14.73□□□□□ -0.05
Rif1Q6PR54 AA543401-201ENSMUST00000164248 1269 ntBASIC14.73□□□□□ -0.05
Rif1Q6PR54 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rif1Q6PR54 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.72□□□□□ -0.05
Rif1Q6PR54 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Gm14701-201ENSMUST00000117156 348 ntBASIC14.72□□□□□ -0.05
Rif1Q6PR54 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rif1Q6PR54 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms