Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rad54bQ6PFE3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rad54bQ6PFE3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rad54bQ6PFE3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Mir6349-201ENSMUST00000184059 97 ntBASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Gm42569-201ENSMUST00000200539 472 ntBASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rad54bQ6PFE3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rad54bQ6PFE3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rad54bQ6PFE3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Mir5133-201ENSMUST00000174955 77 ntBASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rad54bQ6PFE3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rad54bQ6PFE3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms