Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac4Q6NZM9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hdac4Q6NZM9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Hdac4Q6NZM9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Gm5643-201ENSMUST00000117081 966 ntBASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac4Q6NZM9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac4Q6NZM9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Gm10653-202ENSMUST00000139570 835 ntBASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac4Q6NZM9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hdac4Q6NZM9 Gm12382-201ENSMUST00000122005 922 ntBASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac4Q6NZM9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac4Q6NZM9 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac4Q6NZM9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms