Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Gm15378-201ENSMUST00000121894 207 ntBASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retreg2Q6NS82 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retreg2Q6NS82 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg2Q6NS82 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Retreg2Q6NS82 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg2Q6NS82 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg2Q6NS82 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retreg2Q6NS82 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.83■□□□□ 0.61
Retreg2Q6NS82 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Retreg2Q6NS82 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retreg2Q6NS82 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retreg2Q6NS82 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retreg2Q6NS82 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Gm15565-201ENSMUST00000118890 427 ntBASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retreg2Q6NS82 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retreg2Q6NS82 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms