Protein–RNA interactions for Protein: Q6NS45

Ccdc66, Coiled-coil domain-containing protein 66, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc66Q6NS45 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc66Q6NS45 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc66Q6NS45 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc66Q6NS45 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc66Q6NS45 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Gm8495-201ENSMUST00000188740 694 ntBASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc66Q6NS45 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Mir8112-201ENSMUST00000184382 131 ntBASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Flg-201ENSMUST00000050758 1488 ntBASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc66Q6NS45 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccdc66Q6NS45 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Mir5133-201ENSMUST00000174955 77 ntBASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Mir2861-201ENSMUST00000175539 82 ntBASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Rab3c-203ENSMUST00000224180 967 ntBASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc66Q6NS45 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms