Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.81■□□□□ 0.28
Sdc3Q64519 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.81■□□□□ 0.28
Sdc3Q64519 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.81■□□□□ 0.28
Sdc3Q64519 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.81■□□□□ 0.28
Sdc3Q64519 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.81■□□□□ 0.28
Sdc3Q64519 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.81■□□□□ 0.28
Sdc3Q64519 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sdc3Q64519 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sdc3Q64519 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sdc3Q64519 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.8■□□□□ 0.28
Sdc3Q64519 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.8■□□□□ 0.28
Sdc3Q64519 Mir5122-201ENSMUST00000175004 89 ntBASIC16.8■□□□□ 0.28
Sdc3Q64519 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.8■□□□□ 0.28
Sdc3Q64519 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.8■□□□□ 0.28
Sdc3Q64519 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Gm5417-201ENSMUST00000079706 384 ntBASIC16.8■□□□□ 0.28
Sdc3Q64519 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sdc3Q64519 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sdc3Q64519 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sdc3Q64519 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sdc3Q64519 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc3Q64519 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
Sdc3Q64519 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sdc3Q64519 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc3Q64519 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.79■□□□□ 0.28
Sdc3Q64519 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc3Q64519 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc3Q64519 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.79■□□□□ 0.28
Sdc3Q64519 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc3Q64519 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sdc3Q64519 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Sdc3Q64519 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.78■□□□□ 0.28
Sdc3Q64519 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.78■□□□□ 0.28
Sdc3Q64519 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.78■□□□□ 0.28
Sdc3Q64519 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.78■□□□□ 0.28
Sdc3Q64519 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sdc3Q64519 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sdc3Q64519 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sdc3Q64519 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.77■□□□□ 0.28
Sdc3Q64519 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc3Q64519 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Sdc3Q64519 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc3Q64519 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sdc3Q64519 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sdc3Q64519 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc3Q64519 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.76■□□□□ 0.27
Sdc3Q64519 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc3Q64519 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc3Q64519 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sdc3Q64519 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc3Q64519 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sdc3Q64519 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc3Q64519 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sdc3Q64519 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms