Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Gm43859-201ENSMUST00000200075 1412 ntBASIC18■□□□□ 0.47
Six1Q62231 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Six1Q62231 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18■□□□□ 0.47
Six1Q62231 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18■□□□□ 0.47
Six1Q62231 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Gm16401-202ENSMUST00000197463 2074 ntBASIC18■□□□□ 0.47
Six1Q62231 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18■□□□□ 0.47
Six1Q62231 Gm15743-202ENSMUST00000182690 1901 ntBASIC18■□□□□ 0.47
Six1Q62231 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.99■□□□□ 0.47
Six1Q62231 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Six1Q62231 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Six1Q62231 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.99■□□□□ 0.47
Six1Q62231 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Six1Q62231 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.99■□□□□ 0.47
Six1Q62231 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Six1Q62231 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Six1Q62231 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.98■□□□□ 0.47
Six1Q62231 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Six1Q62231 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Six1Q62231 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Six1Q62231 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Six1Q62231 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Gm11643-201ENSMUST00000119578 864 ntBASIC17.97■□□□□ 0.47
Six1Q62231 Mir6349-201ENSMUST00000184059 97 ntBASIC17.97■□□□□ 0.47
Six1Q62231 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.97■□□□□ 0.47
Six1Q62231 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Six1Q62231 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Six1Q62231 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.97■□□□□ 0.47
Six1Q62231 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six1Q62231 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.96■□□□□ 0.47
Six1Q62231 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.96■□□□□ 0.47
Six1Q62231 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Haglr-201ENSMUST00000100000 2085 ntBASIC17.96■□□□□ 0.47
Six1Q62231 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.96■□□□□ 0.47
Six1Q62231 Gm37179-201ENSMUST00000194862 823 ntBASIC17.96■□□□□ 0.47
Six1Q62231 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Six1Q62231 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Six1Q62231 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six1Q62231 Dio3-201ENSMUST00000097228 1449 ntBASIC17.96■□□□□ 0.47
Six1Q62231 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Six1Q62231 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.95■□□□□ 0.46
Six1Q62231 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Six1Q62231 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Six1Q62231 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Six1Q62231 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six1Q62231 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six1Q62231 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms